Information for 2-CATCTTTCTC (Motif 4)

G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A A C T G C T G A C G T A C G T A A C T G C T G A A C G T A C T G
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.867
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif11.27%
Number of Background Sequences with motif231.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets40.4 +/- 27.0bp
Average Position of motif in Background50.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATCTTTCTC-
NNGCACCTTTCTCC
 A C G T A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATCTTTCTC----
--ACTTTCACTTTC
 G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATCTTTCTC
ACCATCTGTT--
 A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CATCTTTCTC
GKVTCADRTTWC--
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATCTTTCTC
GCCATCTGTT--
 A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CATCTTTCTC-
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CATCTTTCTC
GCNGCCATCTTG---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATCTTTCTC
GYCATCMATCAT
 A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CATCTTTCTC------
-AGTATTCTCGGTTGC
 G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CATCTTTCTC-
TGCAGCTGTCCCT
 A C G T A C G T G T A C C G T A A G C T G T A C A C G T C G A T A G C T A G T C A C G T G T A C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T