p-value: | 1e-9 |
log p-value: | -2.255e+01 |
Information Content per bp: | 1.910 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 16.67% |
Number of Background Sequences with motif | 0.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.0 +/- 25.0bp |
Average Position of motif in Background | 49.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC- -----TGACCTTGACCT |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC- -----TGACCTTGACCT |
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Nr5a2/MA0505.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC-- ---GCTGACCTTGAACTN |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC -----TGACCTTGAN- |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC -----TGACCTTGAV- |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACCTCAGACCTTGACC TGACCTCTGACCCCN--- |
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TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACCTCAGACCTTGACC TGACCTTTGACCTC---- |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC ---NATGACCTTGA-- |
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Hnf4a/MA0114.3/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACCTCAGACCTTGACC-- --ATTGGACTTTGACCCC |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ACCTCAGACCTTGACC ----NTGACCTTGA-- |
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