Information for 7-GTGTACTTTKGAA (Motif 9)

A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
Reverse Opposite:
A C G T A C G T G T A C G T A C G T C A C T G A C G T A C T A G A C G T C T G A G T A C C G T A A G T C
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.832
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 30.3bp
Average Position of motif in Background31.2 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGTACTTTKGAA
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGTACTTTKGAA
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGTACTTTKGAA
TGTTTACTTAGG--
 A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACTTTKGAA
TGTTTACTTT----
 A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTACTTTKGAA
TGTTTACTTT----
 A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTGTACTTTKGAA
TCCATGTTTACTTTG---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGTACTTTKGAA----
-TGGACTTTGNNCTNTG
 A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGTACTTTKGAA
NNTGTGGATTSS----
 A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGTACTTTKGAA
CTTTGTTTACTTTTN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGTACTTTKGAA
TNTGTTTACTT-----
 A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A A G T C A C G T A G C T A C G T A C T G A C T G T C G A C G T A
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T A C G T A C G T A C G T A C G T