Information for 5-GTGGCCCTTGGCTCAG (Motif 13)

C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
Reverse Opposite:
A G T C G A C T C T A G C T G A A C T G A G T C A G T C C G T A C G T A C T A G A C T G A C T G G A T C A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 24.0bp
Average Position of motif in Background36.1 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGGCCCTTGGCTCAG
-TGACCTTTGCCCCA-
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG
-TGACCTTTGCCCTAN
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG
-TGACCTTTGCCCTA-
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG
CTGACCTTTG------
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG
-TGGACTTTGNNCTCN
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG
------NTTGGCANN-
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GTGGCCCTTGGCTCAG
-------TTGGCA---
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG-
-TGGACTTTGNNCTNTG
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGGCCCTTGGCTCAG
-TGGCAGTTGG-----
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGGCCCTTGGCTCAG
-TGACCTTTGACCTN-
 C T A G A C G T A C T G C T A G A G T C A G T C A G T C A C G T A C G T A C T G A C T G A G T C A G C T A G T C C G T A A C T G
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T