Information for 9-AGCCCCAACACTT (Motif 12)

C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A T C G A C G T A C G T A C T G C T A G A C T G A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 29.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGCCCCAACACTT---
------ACCACTTGAA
 C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGCCCCAACACTT--
------ACCACTTAA
 C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCCCAACACTT
AAACCGCAA-----
 A C G T C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGCCCCAACACTT--
------ACCACTTAA
 C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCCCCAACACTT--
-----MRSCACTYAA
 C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCCCAACACTT
AAACCACANN----
 A C G T C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCCCAACACTT--
AACACCAAAACAAAGGA
 A C G T A C G T C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCCCCAACACTT----
-NNGGCGACACCTCNNN
 C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCCCAACACTT
AAACCGCAAA----
 A C G T C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCCCCAACACTT
CAAACAACAACACCT
 A C G T A C G T C G T A C T A G A G T C A G T C A G T C A G T C C G T A C G T A A T G C C G T A A G T C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T