Information for 18-CAAAAATCAAGAA (Motif 25)

A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-9.144e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CAAAAATCAAGAA-
AAAAAATCAATAAT
 A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CAAAAATCAAGAA-
AAAAAATCGATAAT
 A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAAAAATCAAGAA-
AAAAAATCGATAAT
 A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAAAATCAAGAA
-AAAAGTCAA---
 A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAAAATCAAGAA
AACAAACAACAAGAG
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAAAATCAAGAA
GCCATAAATCA----
 A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAAAAATCAAGAA
GGCCATAAATCA----
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAAAATCAAGAA
GGCCATAAATCAC---
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAAAATCAAGAA
GAANGTTCTAGAA
 A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAAAATCAAGAA---
TCACCCATCAATAAACA
 A C G T A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A