Information for 1-MTMARCKMWTTKKCCK (Motif 1)

G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
Reverse Opposite:
G T C A A C T G T A C G G T A C G T C A C G T A C G T A G C T A A C G T G T A C T C A G A G C T A C G T A C G T G C T A A C G T
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.777
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif92.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.0 +/- 22.1bp
Average Position of motif in Background53.0 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0036.1_Gsx2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:MTMARCKMWTTKKCCK
NTNNGCTAATTANCNT
 G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---MTMARCKMWTTKKCCK
HWWGTCAGCAWWTTT----
 A C G T A C G T A C G T G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--MTMARCKMWTTKKCCK--
NNNTGAACTCNNTGACCTCN
 A C G T A C G T G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PH0009.1_Bsx/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:MTMARCKMWTTKKCCK
NTNAGNTAATTACCTN
 G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-MTMARCKMWTTKKCCK
NGTCAGCANTTT-----
 A C G T G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:MTMARCKMWTTKKCCK
-----CCGATTGGCT-
 G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:MTMARCKMWTTKKCCK--
-TCCACTAATTAGCGGTT
 G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T A C G T A C G T
A C G T G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MTMARCKMWTTKKCCK
-TGAACCCGATGACCC
 G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:MTMARCKMWTTKKCCK
GTCAGCANNTN-----
 G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--MTMARCKMWTTKKCCK
AAGTCAGCANTTTTN---
 A C G T A C G T G T C A C G A T G T C A C G T A C T G A A G T C A C T G T G C A C G A T A C G T A C G T C A G T A C T G A G T C G T A C A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T A C G T