Information for 1-CTCAGCGCCGAGC (Motif 3)

A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A C T G G T C A A C T G
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.945
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 21.7bp
Average Position of motif in Background48.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCGCCGAGC-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCGCCGAGC-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCAGCGCCGAGC--
-GCCGCGCAGTGCGT
 A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCAGCGCCGAGC
--CAGCC------
 A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTCAGCGCCGAGC
----GCTCCG---
 A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGCGCCGAGC
TGAGTCAGCA------
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCAGCGCCGAGC
CACAGN-------
 A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:8
Score:0.50
Offset:-7
Orientation:forward strand
Alignment:-------CTCAGCGCCGAGC
AGGATGACTCAGCAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCGCCGAGC-
DCHCAGCAGGRGGCC
 A C G T A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTCAGCGCCGAGC
CGCAGCTGCG---
 A G T C A C G T A G T C C G T A A C T G A G T C C T A G A G T C A G T C A C T G C G T A C T A G A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T