Information for 9-ACACAGAGGACAG (Motif 15)

C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C T G A C G T A C T G A G C T
p-value:1e-8
log p-value:-1.934e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 23.4bp
Average Position of motif in Background66.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACACAGAGGACAG
---CAAAGGTCAG
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ACACAGAGGACAG
----TRAGGTCA-
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACACAGAGGACAG
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGAGGACAG
AAAACAAAGG----
 A C G T C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACACAGAGGACAG
---CCAGGAACAG
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACACAGAGGACAG
----AGRGGTCA-
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACACAGAGGACAG---
---CAAAGGTCAAGGG
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACACAGAGGACAG
-AACAAAGG----
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACACAGAGGACAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACACAGAGGACAG---
TCTCAAAGGTCACGAG
 C T G A G T A C G T C A A G T C C G T A C T A G C G T A A C T G A C T G C G T A A G T C C G T A A C T G A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G