Information for 5-AGTGAVAGATAVGBAA (Motif 6)

C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
Reverse Opposite:
A C G T A C G T T A C G A G T C A C T G A C G T C G T A C G A T A T G C A C G T A C T G A C G T G T A C C G T A A T G C A C G T
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.711
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.2 +/- 27.3bp
Average Position of motif in Background54.0 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAVAGATAVGBAA
GAAAGTGAAAGT-------
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGTGAVAGATAVGBAA
AGAAAGTGAAAGTGA-----
 A C G T A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGTGAVAGATAVGBAA
GGAAGTGAAAST-------
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGTGAVAGATAVGBAA
----ANAGATAAGAA-
 C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTGAVAGATAVGBAA
GAAAGTGAAAGT-------
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTGAVAGATAVGBAA
GRAASTGAAAST-------
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAVAGATAVGBAA
NTGATTGACAGN-------
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTGAVAGATAVGBAA
AGGTGHCAGACA-----
 A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGTGAVAGATAVGBAA
CGGAAGTGAAAC--------
 A C G T A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------AGTGAVAGATAVGBAA
AAANNGAAAGTGAAAGTAAAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A C G T A C T G G T C A T A G C C G T A A T C G C G T A C G A T G T C A T A G C C T A G A G T C C G T A G T C A
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A A C G T A C G T A C G T