Information for 3-ADAAGATTGG (Motif 20)

C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G
Reverse Opposite:
T A G C A G T C C G T A G T C A C G A T A G T C C G A T A C G T G C T A A G C T
p-value:1e-5
log p-value:-1.257e+01
Information Content per bp:1.789
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif759.9
Percentage of Background Sequences with motif3.70%
Average Position of motif in Targets47.3 +/- 28.4bp
Average Position of motif in Background50.6 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ADAAGATTGG
--TTGATTGN
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ADAAGATTGG-----
---TGATTGGCTANN
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ADAAGATTGG-------
--CTGATTGGTCNATTT
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ADAAGATTGG--
--CCGATTGGCT
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ADAAGATTGG----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ADAAGATTGG
--AAGCTTG-
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ADAAGATTGG----
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ADAAGATTGG
CNGTGATTTN
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ADAAGATTGG-----
-GGAGAAAGGTGCGA
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ADAAGATTGG---
-TTTGATTGATGN
 C T G A C G A T C G T A C G T A C T A G G C T A A C G T C G A T A C T G A T C G A C G T A C G T A C G T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G