Information for 10-ATGTCATAGTGGT (Motif 18)

C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
Reverse Opposite:
G T C A A G T C G T A C G T C A G T A C A G C T C T G A A C G T C T A G C T G A G T A C C G T A A G C T
p-value:1e-5
log p-value:-1.287e+01
Information Content per bp:1.735
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets44.0 +/- 18.7bp
Average Position of motif in Background51.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGTCATAGTGGT
-TGTCANYT----
 C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGTCATAGTGGT
NTGTCAN------
 C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGTCATAGTGGT
-TGACCTARTT--
 C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCATAGTGGT
CCTGTCAA------
 A C G T C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATGTCATAGTGGT
GATAACATCCTAGTAG-
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATGTCATAGTGGT
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGTCATAGTGGT-
TTGACCTANTTATN
 C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGTCATAGTGGT
YTGWCADY-----
 C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------ATGTCATAGTGGT
TNNNNGGTGTCATNTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATGTCATAGTGGT----
-TGACCCAGTGACCTAC
 C T G A A C G T A C T G G A C T A G T C G T C A A G C T C T G A A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C