Information for 4-ATCACACTGCACC (Motif 12)

C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
Reverse Opposite:
C T A G A C T G A C G T A C T G G A T C C T G A A C T G A G C T A C T G A C G T A C T G T G C A A C G T
p-value:1e-6
log p-value:-1.425e+01
Information Content per bp:1.685
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif114.9
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets43.2 +/- 38.9bp
Average Position of motif in Background52.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATCACACTGCACC
GCGACCACACTG----
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCACACTGCACC
-TCACACCT----
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCACACTGCACC
-TCACACCT----
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCACACTGCACC
-TCACACCT----
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCACACTGCACC
-BCAGACWA----
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCACACTGCACC
ATCACCCCAT---
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCACACTGCACC
-TCAGTCTT----
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCACACTGCACC
NWAACCACADNN----
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCACACTGCACC
-TCACACCT----
 C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATCACACTGCACC
NTTTTCACACCTT---
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A T A G C T C G A A G T C A G C T C T A G T A G C T C G A T A G C A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T