Information for 21-CCATTCACTG (Motif 35)

A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
p-value:1e-2
log p-value:-6.668e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif61.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background56.3 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCATTCACTG-------
-CAATCACTGGCAGAAT
 A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCATTCACTG
GGCCATTAAC--
 A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCATTCACTG-
-AAATCACTGC
 A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCATTCACTG--
ACTTTCACTTTC
 A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCATTCACTG-
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCATTCACTG
ACTAGCCAATCA---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCATTCACTG---
AATCAATTCAATAATT
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCATTCACTG
CAAATCACTG
 A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCATTCACTG
NNGCACCTTTCTCC-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATTCACTG-----
TAATTCAATGAAGTG
 A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G