Information for 19-CAGTTATGAG (Motif 34)

A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C T G
p-value:1e-2
log p-value:-6.809e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets13.0 +/- 0.0bp
Average Position of motif in Background39.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTATGAG
BRRCVGTTDN---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGTTATGAG
GGCVGTTR----
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTTATGAG--
--NTAATGAGCT
 A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PB0176.1_Sox5_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAGTTATGAG-
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTATGAG----
NAATTTTACGAGNTNN
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Nkx2-5/MA0063.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGTTATGAG
CAATTAA---
 A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTATGAG--
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTATGAG
TGGCAGTTGN---
 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTATGAG
NNCAATTANN--
 A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGTTATGAG-
-TTTTATKRGG
 A G T C C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G