Information for 12-WGTGTATTTCWTYCAG (Motif 28)

C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
Reverse Opposite:
T G A C A C G T C T A G C T G A T C G A C G T A C A T G T G C A T G C A C G T A C G A T G C T A A G T C C T G A T A G C C G T A
p-value:1e-3
log p-value:-7.322e+00
Information Content per bp:1.596
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1929.0
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets12.5 +/- 0.5bp
Average Position of motif in Background49.9 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:WGTGTATTTCWTYCAG
TGTGGATTNNN-----
 C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WGTGTATTTCWTYCAG
NNTGTGGATTSS------
 A C G T A C G T C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-WGTGTATTTCWTYCAG
CTTTGTTTACTTTTN--
 A C G T C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----WGTGTATTTCWTYCAG
NNNTATTGAATTGNNN----
 A C G T A C G T A C G T A C G T C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--WGTGTATTTCWTYCAG
GGACTGAATTCATGCC--
 A C G T A C G T C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WGTGTATTTCWTYCAG
-CTGTCTGTCACCT--
 C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WGTGTATTTCWTYCAG
-CTGGCAGNCTGCCA-
 C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--WGTGTATTTCWTYCAG
CCATTGTATGCAAAT---
 A C G T A C G T C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--WGTGTATTTCWTYCAG
NNTGTGGTTT--------
 A C G T A C G T C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:WGTGTATTTCWTYCAG
--TGTCTGDCACCT--
 C G A T A C T G A G C T C T A G C G A T G C T A A C G T A C G T A C G T G T A C C G A T A C G T A G C T A G T C T C G A A C T G
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T