Information for 2-TGATGAKAVTCAWKAG (Motif 2)

C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T G T A C G C A T A C G T A C T G G C T A A G T C C G A T G T A C A C G T A G T C G C T A A G C T G A T C G C T A
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.589
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif1541.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets29.2 +/- 18.5bp
Average Position of motif in Background52.1 +/- 60.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG
TAATGATGATCACTA-
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG-----
----GACGATAATGAGCTTGC
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG--
---TGACANARRCCAGRC
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

POU6F1/MA0628.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG-
-------ATTAATTAAT
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TGATGAKAVTCAWKAG--
--------NTAATGAGCT
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

LHX6/MA0658.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG-
-------ACTAATTAGC
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG---
---AGTTATTAATGAGGTC
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG
-----AAAGTAAACA-
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

EMX2/MA0886.1/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG-
-------GCTAATTAGC
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C G A C T G T C A C G T A A C G T A C G T C G T A T C A G A T G C

MEOX2/MA0706.1/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGATGAKAVTCAWKAG-
-------AGTAATTAAC
 C G A T C A T G C T G A C G A T T A C G G T C A A C T G C G T A T A C G C A G T G T A C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C