Information for 9-ATCAAACATAGTG (Motif 12)

C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.078e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACATAGTG
CCATCAATCAAA---
 A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCAAACATAGTG
GYCATCMATCAT----
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCAAACATAGTG
ATTAAA-------
 C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCAAACATAGTG
AAACAAACATTC--
 A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCAAACATAGTG
TCATCAATCA-----
 A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ATCAAACATAGTG
TCACCCATCAATAAACA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATCAAACATAGTG
DCYAAAAATAGM-
 C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCAAACATAGTG
GAAGATCAATCACTTA-
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T

SOX21/MA0866.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCAAACATAGTG--
AACAATGGTAGTGTT
 C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATCAAACATAGTG
GCCATAAATCA-----
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C T G
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T