Information for 3-GCGTTCCTTTGGG (Motif 3)

A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C G T C A C G T A C G T A A C T G A C T G C G T A C G T A A T G C A C T G A T G C
p-value:1e-12
log p-value:-2.865e+01
Information Content per bp:1.936
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 26.5bp
Average Position of motif in Background39.6 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG---
--ANTCCCTNGGGAAT
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG
---TTCCTCT---
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTCCTTTGGG-
NCCGTTGCTANGNGN
 A C G T A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG---
----TCCCNNGGGACN
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG--
---TGCCCTNGGGCA
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG--
---TGCCCTNGGGCA
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTCCTTTGGG-
NNCGTTGCTATGGNN
 A C G T A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG---
--NTGCCCTAGGGCAA
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG---
----TCCCCTGGGGAC
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCGTTCCTTTGGG--
---TGCCCNGGGGCA
 A T C G A G T C A T C G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A