Information for 7-TWAGGGCGGA (Motif 22)

C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
Reverse Opposite:
A C G T A G T C A T G C C T A G T G A C T G A C A G T C C G A T G C T A G C T A
p-value:1e-7
log p-value:-1.633e+01
Information Content per bp:1.615
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.8 +/- 26.9bp
Average Position of motif in Background32.9 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TWAGGGCGGA
TNNGGGCAG-
 C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TWAGGGCGGA-
TAATGGCGGNC
 C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TWAGGGCGGA
CTAATKGV---
 A C G T C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TWAGGGCGGA-----
NNNTNGGGCGTATNNTN
 A C G T A C G T C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TWAGGGCGGA
TRAGGTCA--
 C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TWAGGGCGGA--
ATTTTNGGGGGGCNN
 A C G T A C G T A C G T C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A A C G T A C G T
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TWAGGGCGGA
TTAAGTGC---
 A C G T C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TWAGGGCGGA
GGAGGGGGAA
 C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TWAGGGCGGA
TTAAGTGGN--
 A C G T C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------TWAGGGCGGA---
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G T A C T A G A C T G A C T G G A T C T A C G T C A G G T C A A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C