Information for 8-GGCCCATTGG (Motif 33)

T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G
Reverse Opposite:
G A T C A T G C C G T A C G T A A G C T T A C G A T C G A C T G G T A C A T G C
p-value:1e-5
log p-value:-1.338e+01
Information Content per bp:1.732
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif4.11%
Number of Background Sequences with motif218.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets52.0 +/- 25.7bp
Average Position of motif in Background50.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGCCCATTGG-----
TGTTCCCATTGTGTACT
 A C G T A C G T T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGCCCATTGG--
--CCGATTGGCT
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCCCATTGG--
---CCATTGTTC
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCCCATTGG---
---CCATTGTTYB
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGCCCATTGG-
---CCTTTGTT
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCCCATTGG--
--NCCATTGTTC
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGCCCATTGG-
---CCWTTGTY
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGCCCATTGG-
-GGCCATTAAC
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCATTGG--
NNGCACCTTTCTCC
 A C G T A C G T T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCCCATTGG--
--NCCATTGTTY
 T A C G A C T G T G A C A T G C A T G C C T G A G C A T C G A T T A C G C A T G A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T