Information for 1-ATGWTCAACCCTT (Motif 2)

G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T
Reverse Opposite:
C T G A T G C A C T A G A C T G C A T G A C G T A C G T A C T G G T C A C G A T A G T C G T C A C A G T
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.686
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.57%
Number of Background Sequences with motif84.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.0 +/- 26.2bp
Average Position of motif in Background52.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGWTCAACCCTT
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A C G T G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGWTCAACCCTT-----
-TTGAAAACCGTTAATTT
 G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATGWTCAACCCTT-----
-ATGGAAACCGTTATTTT
 G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGWTCAACCCTT--
GAAGATCAATCACTTA
 A C G T G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATGWTCAACCCTT--
-----AAACMATTAN
 G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGWTCAACCCTT--
GAAGATCAATCACTAA
 A C G T G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGWTCAACCCTT
ATTGCGCAAC----
 A C G T G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATGWTCAACCCTT--
--ATGCAACAGGTGG
 G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATGWTCAACCCTT
-----CAAGCTT-
 G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATGWTCAACCCTT----
--GAGCAACAGGTGGTT
 G T C A C A G T C T A G C G T A C A G T G T A C C G T A C G T A G A T C G T A C G A T C A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T