Information for 9-AAAGGRAARAGKG (Motif 19)

T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
Reverse Opposite:
A G T C G T A C A G T C A G C T A G T C A C G T A G C T A G C T A G T C G T A C C G A T G A C T A G C T
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.620
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif7.76%
Number of Background Sequences with motif637.3
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets55.1 +/- 28.0bp
Average Position of motif in Background50.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAGGRAARAGKG---
NNAGGGACAAGGGCNC
 T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AAAGGRAARAGKG
AAAGATCAAAGGAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AAAGGRAARAGKG
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAAGGRAARAGKG
ACATCAAAGGNA------
 A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAAGGRAARAGKG
TGCGCATAGGGGAGGAG-
 A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------AAAGGRAARAGKG
TATAGATCAAAGGAAAA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAGGRAARAGKG
AGAAAGTGAAAGTGA
 A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------AAAGGRAARAGKG
NNNAGATCAAAGGANNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAAGGRAARAGKG
AAAAAGCGGAAGTA
 A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------AAAGGRAARAGKG
AAACAGACAAAGGAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C G T A C A T G T C A G T C G A C T G A T G C A T C A G C T G A T C A G C A T G C T A G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T