Information for 6-CAAAAHATVCSCACAG (Motif 9)

A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G
Reverse Opposite:
T A G C A C G T C A T G A G C T A T C G A T G C T C A G A C G T C T G A A G C T C G A T C A G T C G A T A G C T C A G T A T C G
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.567
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif124.6
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets36.5 +/- 13.2bp
Average Position of motif in Background60.2 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAAAAHATVCSCACAG---
--NTNTATGTGCACATNNN
 A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CAAAAHATVCSCACAG----
---CAGATGTGCACATACGT
 A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAHATVCSCACAG
NACAGGAAAT--------
 A C G T A C G T A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAAAAHATVCSCACAG
NACAGGAAAT--------
 A C G T A C G T A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:CAAAAHATVCSCACAG-
-----------CACAGN
 A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RREB1/MA0073.1/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CAAAAHATVCSCACAG-
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.47
Offset:8
Orientation:forward strand
Alignment:CAAAAHATVCSCACAG
--------ATCCAC--
 A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.47
Offset:6
Orientation:forward strand
Alignment:CAAAAHATVCSCACAG--
------NWAACCACADNN
 A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAHATVCSCACAG
AACACCAAAACAAAGGA----
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---CAAAAHATVCSCACAG
ATGCAACAGGTGG------
 A C G T A C G T A C G T A T G C G T C A C T G A C G T A G T C A G C A T T C G A A G C T T G C A A G T C A T C G A T G C C T G A G A T C T C G A A T C G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T