Information for 8-CTGACCTGACTAG (Motif 9)

G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
Reverse Opposite:
A T G C G C A T C T G A A C T G A C G T A T G C G T C A A C T G A C T G A G C T A G T C C G T A C T A G
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.777
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif50.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets46.7 +/- 24.4bp
Average Position of motif in Background43.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTAG
-TGACCTYA----
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGACCTGACTAG
ATGGGGTGAT---
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGACTAG
-TGACCT------
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGACCTGACTAG
---NCGTGACN--
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTGACTAG
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGACCTGACTAG
GTGGCGTGACNG-
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTGACTAG
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGACCTGACTAG
----CATGAC---
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGACCTGACTAG
CGGTGACGTCAC---
 A C G T A C G T G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGACCTGACTAG
GTGGGGTGAT---
 G A T C A C G T A C T G C T G A G T A C G T A C C A G T A T C G C G T A G T A C A G C T C G T A T A C G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T