Information for 3-CCAAACTGGC (Motif 4)

T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C
Reverse Opposite:
C T A G T G A C G T A C C G T A A C T G A C G T A G C T A C G T C A T G A T C G
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.675
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif15.15%
Number of Background Sequences with motif1621.4
Percentage of Background Sequences with motif3.93%
Average Position of motif in Targets54.5 +/- 25.3bp
Average Position of motif in Background48.0 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCAAACTGGC---
-CAAGATGGCGGC
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCAAACTGGC-
-CCAACTGCCA
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTGGC----
CGACCAACTGCCATGC
 A C G T A C G T T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTGGC---
CGACCAACTGCCGTG
 A C G T A C G T T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCAAACTGGC-
-CCAACTGCCA
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAAACTGGC-
-NHAACBGYYV
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCAAACTGGC---
-CAAGATGGCGGC
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAAACTGGC--
--AAACCGGTTT
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C A C G T A C G T
A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAAACTGGC
CCAGACAG--
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAAACTGGC
CCAGACRSVB
 T A G C G T A C T G C A T C G A T G C A T G A C G C A T C A T G A C T G G A T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C