Information for 11-CCCACAGAGA (Motif 21)

A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
Reverse Opposite:
A C G T A G T C A C G T G T A C A C G T A C T G A C G T A C T G A C T G C T A G
p-value:1e-3
log p-value:-7.459e+00
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif179.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets47.4 +/- 29.1bp
Average Position of motif in Background48.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAGAGA
AAACCACAGAN-
 A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCACAGAGA
NWAACCACADNN-
 A C G T A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAGAGA
AAACCACAGC--
 A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAGAGA
CGCCCCCTGACA
 A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAGAGA
CRCCCACGCA--
 A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCACAGAGA
TACCCGCATN--
 A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCACAGAGA
AAACCACANN--
 A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCACAGAGA
NAAACCACAG---
 A C G T A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCACAGAGA
ATCCAC-----
 A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCCACAGAGA-
AAGCCCCCCAAAAAT
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C G T C A A G T C C G T A A C T G C G T A T C A G C G T A A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T