Information for 1-AAACMGGTTTKDC (Motif 2)

C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
Reverse Opposite:
T A C G G C A T T G C A T C G A C T G A C T G A A G T C G T A C C A T G A T C G A G C T A G C T G A C T
p-value:1e-31
log p-value:-7.180e+01
Information Content per bp:1.638
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.48%
Number of Background Sequences with motif391.7
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets49.3 +/- 25.3bp
Average Position of motif in Background50.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-AAACMGGTTTKDC
NAAACCGGTTTT--
 A C G T C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAACMGGTTTKDC
AAACCGGTTT---
 C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AAACMGGTTTKDC-------
AAACYKGTTWDACMRGTTTB
 C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

SCRT2/MA0744.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAACMGGTTTKDC
CCACCTGTTGCAT
 C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAACMGGTTTKDC
GAGCAACAGGTGGTT-
 A C G T A C G T A C G T C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:-9
Orientation:reverse strand
Alignment:---------AAACMGGTTTKDC
AACCGGTTNNAACCGGTTTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAACMGGTTTKDC
-AACAGGTGT---
 C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AAACMGGTTTKDC
GANGTTAACTAGTTTNN-
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C A C G T

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAACMGGTTTKDC-
AATATACATGTAAAATT
 A C G T A C G T A C G T C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAACMGGTTTKDC
-ACCCGGATGTA-
 C T G A C T G A C T G A A T G C G T A C C A T G A C T G A G C T A G C T A C G T A C G T C G T A A T G C
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T