Information for 15-TAGGCCTGGCTCC (Motif 19)

G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G A T C G T A
p-value:1e-8
log p-value:-1.918e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.5 +/- 24.8bp
Average Position of motif in Background44.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TAGGCCTGGCTCC
-AGGCCTNG----
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAGGCCTGGCTCC
-AGGCCTAG----
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAGGCCTGGCTCC-
CAGGCCNNGGCCNN
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAGGCCTGGCTCC
CAAAGGCGTGGCCAG
 A C G T A C G T G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.61
Offset:8
Orientation:forward strand
Alignment:TAGGCCTGGCTCC-
--------GCTCCG
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGGCCTGGCTCC----
--TGCCTGCGYCMCCTT
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGGCCTGGCTCC
GTCATGCHTGRCTGS
 A C G T A C G T G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAGGCCTGGCTCC
--GGTCTGGCAT-
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAGGCCTGGCTCC
----NTTGGCANN
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAGGCCTGGCTCC-
--TGTCTGDCACCT
 G A C T C G T A C T A G A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T