Information for 12-GAAGAAAACAAAG (Motif 13)

A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G
Reverse Opposite:
A G T C A C G T A C G T A G C T A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T G T A C
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 19.6bp
Average Position of motif in Background62.6 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GAAGAAAACAAAG
CAAAAGTAAACAAAG
 A C G T A C G T A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GAAGAAAACAAAG-----
-AGAAGAACAAAGGACTA
 A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GAAGAAAACAAAG-
----AAAACAAAGG
 A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAAGAAAACAAAG-----
-ATAAGAACAAAGGACTA
 A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAAGAAAACAAAG--
AAAAAGTAAACAAACAC
 A C G T A C G T A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAAGAAAACAAAG--
AAAAAGTAAACAAACAC
 A C G T A C G T A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAAGAAAACAAAG--
AAAAAGTAAACAAAGAC
 A C G T A C G T A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAAGAAAACAAAG
-AAGTAAACAAA-
 A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAGAAAACAAAG
TAAGTAAACAAA-
 A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GAAGAAAACAAAG-
----AAAACAATGG
 A C T G C G T A C G T A C T A G C G T A C G T A C G T A C G T A A G T C C T G A C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G