Information for 3-CCKCCTGGRACMCGGG (Motif 12)

G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
Reverse Opposite:
A T G C G T A C G T A C A C T G A C G T C T A G A C G T A G T C A G T C A T G C G T C A C T A G T C A G G T A C A C T G C T A G
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.691
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif34.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.4 +/- 26.2bp
Average Position of motif in Background53.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCKCCTGGRACMCGGG
---CCAGGAACAG---
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCKCCTGGRACMCGGG---
---NNAGGGACAAGGGCNC
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCKCCTGGRACMCGGG
------GGAACAAAGR
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCKCCTGGRACMCGGG
NGNTCTAGAACCNGV-
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCKCCTGGRACMCGGG-
-------GAACAATGGN
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCKCCTGGRACMCGGG
------VRRACAAWGG
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCKCCTGGRACMCGGG
CTTCCNGGAA------
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCKCCTGGRACMCGGG
------AAAACAATGG
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCKCCTGGRACMCGGG---
---CTTGGCANNNTGCCAA
 G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCKCCTGGRACMCGGG
NNGATCTAGAACCTNNN
 A C G T G A T C T G A C C A T G A G T C A G T C A C G T A T C G A C T G T C A G G T C A A G T C T G C A G T A C C A T G A C T G T A C G
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G