Information for 1-CTGGGAMTTGTAGTYY (Motif 3)

G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
Reverse Opposite:
C T A G C T A G G T C A A G T C A G C T G C T A A G T C T C G A C G T A A C G T C A G T G T A C A G T C A G T C C T G A A C T G
p-value:1e-18
log p-value:-4.332e+01
Information Content per bp:1.715
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif281.3
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets47.6 +/- 25.5bp
Average Position of motif in Background47.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.88
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGAMTTGTAGTYY
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTYY
--GGGAATTGTAGT--
 G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGAMTTGTAGTYY
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAMTTGTAGTYY
WDNCTGGGCA---------
 A C G T A C G T A C G T G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGAMTTGTAGTYY
RGSMTBCTGGGAAAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAMTTGTAGTYY
CSTGGGAAAD-------
 A C G T G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTYY-
-------CTGTGGTTTN
 G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTYY-
-----NNHTGTGGTTWN
 G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTYY
------NNTGTGGTTT
 G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGGGAMTTGTAGTYY
------GCTGTGGTTT
 G T A C A G C T A C T G A C T G A C T G G T C A T G C A G C A T A G C T A C T G C A G T T C G A A C T G A C G T G A T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T