Information for 1-CGAGAGAGAC (Motif 8)

T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G C T A G T C A C G T A G T C G C A T A T G C A T C G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.864
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif174.1
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets45.4 +/- 24.5bp
Average Position of motif in Background51.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAGAGAC
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGAGAGAGAC-
AGGTGHCAGACA
 A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGAGAGAGAC--
AGGTGNCAGACAG
 A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGAGAGAGAC---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CGAGAGAGAC
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAGAGAGAC--
GGTTAGAGACCT
 T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGAGAGAGAC---
-NTGATTGACAGN
 T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAGAGAC
GNNACCGAGAATNNN
 A C G T A C G T A C G T A C G T A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGAGAGAGAC---
-BTGABTGACAGS
 T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGAGAGAGAC
TTGACCGAGAATTCC
 A C G T A C G T A C G T A C G T A C G T T A G C A T C G C G T A A C T G C G T A A C T G T C G A A C T G C G T A A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C