Information for 6-GCKGCGASTACGA (Motif 11)

A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
Reverse Opposite:
A C G T A G T C A C T G A C G T G T C A A T C G A C G T A G T C A C T G A G T C G T A C A C T G A G T C
p-value:1e-6
log p-value:-1.557e+01
Information Content per bp:1.875
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 15.4bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCKGCGASTACGA--
---GCGACCACACTG
 A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7A/MA0750.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCKGCGASTACGA-
--GGCGACCACCGA
 A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A A C G T
A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCKGCGASTACGA
-CTGCGCATGCGC
 A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCKGCGASTACGA---
NGCTGCGATATCGNCGC
 A C G T A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A A C G T A C G T A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GCKGCGASTACGA
CGCAGCTGCG-------
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCKGCGASTACGA
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCKGCGASTACGA
---GGGAGGACNG
 A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCKGCGASTACGA
GCAGTGATTT---
 A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCKGCGASTACGA----
ACTCCAAGTACTTGGAA
 A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------GCKGCGASTACGA
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G C G T A A T C G A C G T C G T A A G T C A C T G T C G A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T