Information for 8-WRRGAAYASTKRKTCM (Motif 8)

C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A G T C A A G C T G T C A C G T A A T C G A C G T C T A G A C G T A C G T A G T C G A C T A G T C C G A T
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.779
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif10.34%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 30.0bp
Average Position of motif in Background36.9 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WRRGAAYASTKRKTCM
TTAAGAACAATAAATT-
 A C G T C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-WRRGAAYASTKRKTCM
TNNAGAACAATANATNN
 A C G T C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WRRGAAYASTKRKTCM
NTTNAGAACAATTA----
 A C G T A C G T C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:WRRGAAYASTKRKTCM
----AACAGCTGTT--
 C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
A C G T A C G T A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WRRGAAYASTKRKTCM
CCAGGAACAG-------
 A C G T C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-WRRGAAYASTKRKTCM
TTTAGAACAATAAAAT-
 A C G T C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WRRGAAYASTKRKTCM
-VAGRACAKWCTGTYC
 C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WRRGAAYASTKRKTCM-
-NAGNACANNNTGTNCT
 C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C A C G T
A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:WRRGAAYASTKRKTCM
-AAGAACATWHTGTTC
 C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C
A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WRRGAAYASTKRKTCM-
-NAGAACAGNCTGTNCT
 C G T A C T A G C T A G A C T G C G T A C G T A A G T C C G T A T A C G A C G T A C G T T C A G A C G T A C G T A G T C G T A C A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T