Information for 23-CATCCCAGCAAGA (Motif 43)

A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C T G C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.394e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CATCCCAGCAAGA--
CCACACAGCAGGAGA
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CATCCCAGCAAGA--
CCACACAGCAGGAGA
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATCCCAGCAAGA--
GAGCACAGCAGGACA
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CATCCCAGCAAGA
NNNTCCATCCCATAANN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CATCCCAGCAAGA--
---CACAGCAGGGGG
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATCCCAGCAAGA
--DCTCAGCAGG-
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATCCCAGCAAGA----
--DCHCAGCAGGRGGCC
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCAGCAAGA
RCATTCCWGG----
 A C G T A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATCCCAGCAAGA
GATAACATCCTAGTAG--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATCCCAGCAAGA
TTTCCCAGAAN--
 A G T C C G T A A C G T A G T C A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T