Information for 12-TAAGTGTATC (Motif 39)

A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C C G T A A G T C A C G T A C G T C G T A
p-value:1e-3
log p-value:-7.394e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background55.7 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TAAGTGTATC---
--AATGTATCAAT
 A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGTATC
TTAAGTGGN--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGTATC
TTAAGTGC---
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGTATC
TTAAGTGGT--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGTATC--
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGTATC--
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGTATC-
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAAGTGTATC
TTRAGTGSYK-
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAAGTGTATC------
AATAGGGTATCATATAT
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGTATC
TTAAGTGCTT-
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A C G T A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T