Information for 10-TCACTBAVTTAGT (Motif 22)

C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C C G A T C G T A C G T A A G T C G C A T T A G C C G T A C T A G C G A T C T A G C G T A
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.745
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif13.79%
Number of Background Sequences with motif110.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets58.2 +/- 30.6bp
Average Position of motif in Background52.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0132.1_Pax6/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCACTBAVTTAGT--
GNNAATTAATTAATCA
 A C G T C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCACTBAVTTAGT
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T

PH0159.1_Rhox6/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCACTBAVTTAGT----
TGCCTTAATTAATGCTC
 C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

PH0030.1_Esx1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCACTBAVTTAGT----
TCNATTAATTAATNNAN
 C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T A G C G T C A T C G A G A C T G A C T C G T A C T G A A G C T G A C T C T G A C T G A G A C T A T C G T C A G C G T A C G A T

PH0090.1_Lbx2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCACTBAVTTAGT----
TGCATTAATTAATGCGA
 C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCACTBAVTTAGT----
-GNATTAATTAGTTNNC
 C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0147.1_Pou3f2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCACTBAVTTAGT---
GATAATTAATTAGTTTG
 A C G T C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

PH0001.1_Alx3/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCACTBAVTTAGT---
NTNAGCTAATTAGTTNA
 A C G T C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A G T C C G A T A T G C T C G A C T A G G A T C A G C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C G A T A G C T G C T A

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCACTBAVTTAGT
--AATTAATTAGT
 C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0108.1_Msx3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCACTBAVTTAGT----
-NNNTTAATTGGTTTTN
 C G A T A G T C C G T A A G T C A C G T A C T G C G T A T A C G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G