Information for 15-AGTCACTGTCCACAAA (Motif 19)

C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
Reverse Opposite:
A C G T C G A T A C G T A C T G A C G T A C T G A C T G C T G A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.552e+01
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 41.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCACTGTCCACAAA
AGGTCANTGACCTN---
 A C G T C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCACTGTCCACAAA
CAATCACTGGCAGAAT-
 A C G T C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTCACTGTCCACAAA---
--TACATGTGCACATAAAA
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGTCACTGTCCACAAA
-------ATCCAC---
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTCACTGTCCACAAA
AGTCACGC--------
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGTCACTGTCCACAAA
GGGGTCAAAGTCCAAT--
 A C G T A C G T C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGTCACTGTCCACAAA---
--CAGATGTGCACATACGT
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGTCACTGTCCACAAA-
-----NWAACCACADNN
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGTCACTGTCCACAAA
----SCTGTCARCACC
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGTCACTGTCCACAAA----
----AAAGTAAACAAAAATT
 C G T A A C T G C G A T A G T C C G T A A G T C A C G T C T A G A G C T A G T C A G T C C G T A A G T C G T C A C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T