Information for 9-ACAAACTATGAAT (Motif 11)

C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C C G T A C G A T C G T A A C T G A G C T A G C T A C G T T C A G C G A T
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 26.4bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAAACTATGAAT
AATAAACAATN---
 A C G T C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAAACTATGAAT--
ATAAACAATTAAACA
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAAACTATGAAT------
--AAAATATGCATAATAAA
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACAAACTATGAAT
-VRAACAATGG--
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:ACAAACTATGAAT----
-------ATGMATATDC
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAAACTATGAAT
-AAAACAATGG--
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAAACTATGAAT--
TNNAGAACAATANATNN
 A C G T A C G T C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACAAACTATGAAT--
-NNTNTCATGAATGT
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T A C G T A C G T
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACAAACTATGAAT
--RAACAATGGN-
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:ACAAACTATGAAT----
-------ATGAATATTC
 C G T A A G T C C G T A C T G A C T G A A G T C C G A T C G T A A C G T A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C