Information for 5-GARWGCCAGYTRC (Motif 5)

A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A C T G A A G T C A C G T A C T G A C T G A G T C C G A T A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.663e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 22.3bp
Average Position of motif in Background51.2 +/- 44.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GARWGCCAGYTRC
---TGGCAGTTGN
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GARWGCCAGYTRC
NTGATTGACAGN---
 A C G T A C G T A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GARWGCCAGYTRC
-CGTGCCAAG---
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GARWGCCAGYTRC
---TGCCAA----
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GARWGCCAGYTRC
--ATGCCAGACN-
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GARWGCCAGYTRC-
-NGNGACAGCTGCN
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GARWGCCAGYTRC--
GATATTGACAGCTGCGT
 A C G T A C G T A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GARWGCCAGYTRC
---TGGCAGTTGG
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GARWGCCAGYTRC
BTGABTGACAGS---
 A C G T A C G T A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GARWGCCAGYTRC-
--VNAVCAGCTGGC
 A C T G C G T A C T A G C G T A A C T G A G T C A G T C C G T A C T A G A G C T C G A T C T G A A G T C A C G T
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C