Information for 13-ATACARKGYGCWC (Motif 20)

C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G A G T C C T G A G T A C G T C A A G T C A C G T A C T G A C G T C G T A A G C T
p-value:1e-7
log p-value:-1.655e+01
Information Content per bp:1.871
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 18.6bp
Average Position of motif in Background25.5 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATACARKGYGCWC-
--ACAAAGGNBCCT
 C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATACARKGYGCWC
--ACAAAG-----
 C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATACARKGYGCWC
NTTGATACATT------
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ATACARKGYGCWC
ATTTGCATACAATGG----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATACARKGYGCWC-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATACARKGYGCWC------
--TACATGTGCACATAAAA
 C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATACARKGYGCWC------
--CAGATGTGCACATACGT
 C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0177.1_Sox7_2/Jaspar

Match Rank:8
Score:0.55
Offset:-9
Orientation:reverse strand
Alignment:---------ATACARKGYGCWC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATACARKGYGCWC
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ATACARKGYGCWC------
--NNNNTGAGCACTGTNNG
 C T G A A C G T C G T A A G T C C G T A T C A G A C G T A C T G A G C T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G