Information for 8-GTGTGTTAGG (Motif 11)

C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
Reverse Opposite:
A T G C A G T C A C G T T G C A G T C A A G T C G T C A G A T C C G T A G A T C
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.833
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif100.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets47.6 +/- 26.3bp
Average Position of motif in Background46.7 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGTGTTAGG
GTTTGTT---
 C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTTAGG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTTAGG---
NCNTTTGTTATTTNN
 A C G T A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTTAGG--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGTTAGG
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTTAGG
CAGTGTGGTCGC
 A C G T A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGTGTTAGG
NNTGTGGATTSS-
 A C G T A C G T A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGTGTTAGG
AGGTGTGA--
 C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTTAGG
AAGGTGTKAA-
 A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTTAGG
TGTGGATTNNN
 A C G T C T A G A C G T C A T G A C G T C T A G A C G T A C G T G T C A A C T G T A C G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A