Information for 19-GGCAATACAC (Motif 52)

A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.096e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background68.8 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGCAATACAC---
-SSAATCCACANN
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGCAATACAC-
TCCAATCCACA
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGCAATACAC---
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCAATACAC
-GCAATAAAA
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCAATACAC
AAGCCATAAAA
 A C G T A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCAATACAC-
GGTAATAAAAA
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCAATACAC
GGAAATCCCC
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCAATACAC-
-GTCATAAAAN
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCAATACAC---
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCAATACAC
GGAAATTCCC
 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C