Information for 23-AGACAGAAGATAG (Motif 43)

C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGACAGAAGATAG--
-AAGATAAGATAACA
 C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------AGACAGAAGATAG
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGAAGATAG
CCAGACAG-------
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGACAGAAGATAG
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGACAGAAGATAG
AGAGRRACAGCWGAC--
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGACAGAAGATAG
---CCAAAAATAG
 C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGACAGAAGATAG--
TGACANARRCCAGRC
 C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGACAGAAGATAG
-AACAGATGGT--
 C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGACAGAAGATAG--
-------AGATAASR
 C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGACAGAAGATAG
----NGAAGC---
 C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T