Information for 22-GAGAAAGAGAGTA (Motif 42)

A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGAAAGAGAGTA--
NNNACCGAGAGTNNN
 A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGAAAGAGAGTA--
TTGACCGAGAATTCC
 A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAGAAAGAGAGTA
AGAAAGTGAAAGTGA---
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAAGAGAGTA
GAAAGTGAAAGT-----
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGAAAGAGAGTA--
GNNACCGAGAATNNN
 A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGAAAGAGAGTA
AGAGGAAGTG----
 A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGAAAGAGAGTA
GAAAGTGAAAGT-
 A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAGAAAGAGAGTA---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAGAAAGAGAGTA
GAAACTGAAACT-
 A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GAGAAAGAGAGTA--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T