Information for 11-GCTTAACCCC (Motif 36)

A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background32.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCTTAACCCC
-CTTAATCCC
 A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAACCCC-----
NNANTTGACCCCTNNNN
 A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCTTAACCCC----
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAACCCC-----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCTTAACCCC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCTTAACCCC
--TTAATCCC
 A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCTTAACCCC-
---TAATCCCN
 A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTTAACCCC-
-NYTAATCCYB
 A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCTTAACCCC----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAACCCC-----
NNCNTGACCCCGCTCT
 A C G T A C T G A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T