Information for 3-TATHTTGGGGCAAATG (Motif 3)

A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
Reverse Opposite:
A T G C C G T A A C G T A C G T C G A T C T A G A G T C G T A C A G T C A G T C C G T A C T G A C G T A C T G A C G A T C G T A
p-value:1e-10
log p-value:-2.353e+01
Information Content per bp:1.788
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.0 +/- 28.0bp
Average Position of motif in Background65.4 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TATHTTGGGGCAAATG---
-----TGGGGCAAAGGTCA
 A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0075.1_Sp100_1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TATHTTGGGGCAAATG
-ATTTTCCGNNAAAT-
 A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
A C G T G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TATHTTGGGGCAAATG
TTTTTATTGG--------
 A C G T A C G T A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TATHTTGGGGCAAATG
TTTTATKRGG-------
 A C G T A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TATHTTGGGGCAAATG
GCTATTTTTGGM------
 A C G T A C G T A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TATHTTGGGGCAAATG
NTTTTATTGG--------
 A C G T A C G T A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TATHTTGGGGCAAATG
NNAATTTTATTGGNTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TATHTTGGGGCAAATG
CTATTTTTGG-------
 A C G T A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TATHTTGGGGCAAATG---
-----TAGGGCAAAGGTCA
 A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TATHTTGGGGCAAATG
CATTGTTATGCAAAT-
 A C G T C G T A A G C T G A C T A G C T A C G T C T A G A C T G A C T G C T A G A G T C C G T A C G T A C G T A C G A T A T C G
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T