Information for 16-TTTCAGVAAATCT (Motif 29)

A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T A C G T A C G T A G T C A G C T A T C G G T C A C G T A C G T A
p-value:1e-3
log p-value:-8.244e+00
Information Content per bp:1.802
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif57.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.7 +/- 36.8bp
Average Position of motif in Background46.3 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGVAAATCT
ATTTCCNGGAAATN-
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTTCAGVAAATCT
-NACAGGAAAT--
 A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTTCAGVAAATCT---
------CAAATCACTG
 A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGVAAATCT
TTTCCAGGAAA---
 A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTCAGVAAATCT
TTTCCAGGAAATGG
 A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAGVAAATCT
TTTCCNGGAAAN--
 A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGVAAATCT
NCTTCCNGGAAGNN-
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGVAAATCT-
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PB0075.1_Sp100_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGVAAATCT
ATTTTCCGNNAAAT-
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAGVAAATCT-
TTTCCTGGAAAGNNN
 A C G T A C G T A C G T A C G T A T G C C T G A C T A G T A C G G T C A C G T A C G T A A C G T G T A C A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A