Information for 3-GACCCTGCCA (Motif 28)

A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.999e+00
Information Content per bp:1.948
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.4 +/- 32.6bp
Average Position of motif in Background41.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GACCCTGCCA
AAGACCCYYN--
 A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCTGCCA-
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCTGCCA-
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GACCCTGCCA-
---CTTGGCAA
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GACCCTGCCA
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACCCTGCCA
TGACCTTGAV-
 A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GACCCTGCCA-
---GCTGTCAA
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GACCCTGCCA-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACCCTGCCA--
---CGTGCCAAG
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACCCTGCCA--
--VGCTGWCAVB
 A C T G C G T A A G T C A G T C A G T C A C G T A C T G G T A C A G T C G T C A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C